bash
docker run -it ghcr.io/lmweber/principlessta:devel RPreamble
Package: PrinciplesSTA
Compiled: 2024-09-29
Package version: 0.99.0
R version: R version 4.4.1 (2024-06-14)
Bioconductor version: 3.20
License: CC BY 4.0
Docker image
A Docker image built from this repository is available here: ghcr.io/lmweber/principlessta
Get started now
You can get access to all the packages used in this book in <1 minute, using this command in a terminal:
RStudio Server
An RStudio Server instance can be initiated from the Docker image as follows:
bash
docker run \
--volume <local_folder>:<destination_folder> \
-e PASSWORD=OHCA \
-p 8787:8787 \
ghcr.io/lmweber/principlessta:develThe initiated RStudio Server instance will be available at: https://localhost:8787
BiocBook
This book is built using the BiocBook package, developed by Jacques Serizay for building Quarto books with Bioconductor.
More details on how to build a book using BiocBook can be found in the BiocBook book.
Session info
Click to expand
sessioninfo::session_info(
installed.packages()[,"Package"],
include_base = TRUE
)## ─ Session info ────────────────────────────────────────────────────────────
## setting value
## version R version 4.4.1 (2024-06-14)
## os Ubuntu 22.04.5 LTS
## system x86_64, linux-gnu
## ui X11
## language (EN)
## collate C
## ctype en_US.UTF-8
## tz Etc/UTC
## date 2024-09-29
## pandoc 3.4 @ /usr/bin/ (via rmarkdown)
##
## ─ Packages ────────────────────────────────────────────────────────────────
## package * version date (UTC) lib source
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## BiocGenerics 0.51.2 2024-09-27 [2] Bioconductor 3.20 (R 4.4.1)
## BiocIO 1.15.2 2024-08-23 [2] Bioconductor 3.20 (R 4.4.1)
## BiocManager 1.30.25 2024-08-28 [2] CRAN (R 4.4.1)
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## futile.options 1.0.1 2018-04-20 [2] RSPM (R 4.4.0)
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## GenomeInfoDb 1.41.1 2024-05-24 [2] Bioconductor 3.20 (R 4.4.0)
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## vctrs 0.6.5 2023-12-01 [2] RSPM (R 4.4.0)
## vipor 0.4.7 2023-12-18 [2] RSPM (R 4.4.0)
## viridis 0.6.5 2024-01-29 [2] RSPM (R 4.4.0)
## viridisLite 0.4.2 2023-05-02 [2] RSPM (R 4.4.0)
## waldo 0.5.3 2024-08-23 [2] RSPM (R 4.4.0)
## whisker 0.4.1 2022-12-05 [2] RSPM (R 4.4.0)
## withr 3.0.1 2024-07-31 [2] RSPM (R 4.4.0)
## xfun 0.47 2024-08-17 [2] RSPM (R 4.4.0)
## XML 3.99-0.17 2024-06-25 [2] RSPM (R 4.4.0)
## xml2 1.3.6 2023-12-04 [2] RSPM (R 4.4.0)
## xopen 1.0.1 2024-04-25 [2] RSPM (R 4.4.0)
## xtable 1.8-4 2019-04-21 [2] RSPM (R 4.4.0)
## XVector 0.45.0 2024-05-01 [2] Bioconductor 3.20 (R 4.4.0)
## yaml 2.3.10 2024-07-26 [2] RSPM (R 4.4.0)
## zip 2.3.1 2024-01-27 [2] RSPM (R 4.4.0)
## zlibbioc 1.51.1 2024-06-05 [2] Bioconductor 3.20 (R 4.4.0)
##
## [1] /tmp/RtmpAWkfCW/Rinst8c9ed4df6
## [2] /usr/local/lib/R/site-library
## [3] /usr/local/lib/R/library
##
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